The detailed information of tRNA gene sequence


Sequence ID>WENV170722763
Genome IDLSQX01242205
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1148
End posion on genome 1224
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctcatatag
tRNA gene sequence 
GGGCTCATAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
ctagcagata
Secondary structure (Cloverleaf model)
>WENV170722763	Ile	GAT
                   g      ACCA ctagcagata
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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