The detailed information of tRNA gene sequence


Sequence ID>WENV170722838
Genome IDLSQX01245314
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1129
End posion on genome 1214
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggagttctct
tRNA gene sequence 
GTAGACGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCCCTGGGACTC
GAGGGTTCAAATCCCTCCGTCTGCGCtt
Downstream region at tRNA end position 
aacgtacgca
Secondary structure (Cloverleaf model)
>WENV170722838	Ser	GCT
                   t      GCtt aacgtacgca
                     G - C
                     T + G
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCCCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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