The detailed information of tRNA gene sequence


Sequence ID>WENV170722865
Genome IDLSQX01246640
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 24590
End posion on genome 24514
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cacgggcctt
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
cttttgacca
Secondary structure (Cloverleaf model)
>WENV170722865	Pro	CGG
                   t      ACCA cttttgacca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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