The detailed information of tRNA gene sequence


Sequence ID>WENV170722913
Genome IDLSQX01248222
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 18290
End posion on genome 18214
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tcttttaaat
tRNA gene sequence 
TCCTCCTTAGCTCAGTTGGTTAGAGCACATGACTGTTAATCATGGGGTCCTTGGTTCAAG
TCCAAGAGGGGGAGCAA
Downstream region at tRNA end position 
ctcaaaatca
Secondary structure (Cloverleaf model)
>WENV170722913	Asn	GTT
                   t      GCAA ctcaaaatca
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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