The detailed information of tRNA gene sequence


Sequence ID>WENV170722936
Genome IDLSQX01249290
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 638
End posion on genome 565
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cggaaaccca
tRNA gene sequence 
GGGCTCATAGCTCAGTTGGAAGAGCGCCGCCTTTGCGAGGCGGAGGCCGGGGGTTCAAAT
CCCCCTGAGTCCACtg
Downstream region at tRNA end position 
ggcaggattc
Secondary structure (Cloverleaf model)
>WENV170722936	Ala	TGC
                   a      ACtg ggcaggattc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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