The detailed information of tRNA gene sequence


Sequence ID>WENV170723026
Genome IDLSQX01252237
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 8540
End posion on genome 8467
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagggcttat
tRNA gene sequence 
ACGGGTCTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGC
CTCTCGACCCGTGCac
Downstream region at tRNA end position 
atacgatctg
Secondary structure (Cloverleaf model)
>WENV170723026	Trp	CCA
                   t      GCac atacgatctg
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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