The detailed information of tRNA gene sequence


Sequence ID>WENV170723095
Genome IDLSQX01254778
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 14260
End posion on genome 14171
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttacttaac
tRNA gene sequence 
GCCGAGGTGGCGGAATAGGCAGACGCGGCGGACTCAAAATCCGTTGGGGTGGAGAACCTC
GTGCGGGTTCAACTCCCGCCCTCGGCACCA
Downstream region at tRNA end position 
aataacaaca
Secondary structure (Cloverleaf model)
>WENV170723095	Leu	CAA
                   c      ACCA aataacaaca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C G C C C     A
      T A A        G      | | | | |     A
    A       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGGTGGAGAACCTCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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