The detailed information of tRNA gene sequence


Sequence ID>WENV170723119
Genome IDLSQX01255530
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 17816
End posion on genome 17740
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacttatcgg
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCTCCCGCAACCA
Downstream region at tRNA end position 
gatttatcat
Secondary structure (Cloverleaf model)
>WENV170723119	Met	CAT
                   g      ACCA gatttatcat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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