The detailed information of tRNA gene sequence


Sequence ID>WENV170723120
Genome IDLSQX01255559
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1046
End posion on genome 1123
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aataccacag
tRNA gene sequence 
GGGTCTGTGGCTTAGCCAGGACATAGCGCCGGGCTTCTAACCCGGATGCCGAGGGTTCGA
ATCCCTCCAGGCCCGTCA
Downstream region at tRNA end position 
tttttatcct
Secondary structure (Cloverleaf model)
>WENV170723120	Arg	TCT
                   g      GTCA tttttatcct
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | | | | |     G
  A         T T C G       G A G G G     C
  G           | | |                 T T
  G         T A G C
    A C A          G     ATGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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