The detailed information of tRNA gene sequence


Sequence ID>WENV170723135
Genome IDLSQX01256412
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3415
End posion on genome 3326
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagagggtcc
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGGGTTCACGCCCA
CCGTGGGTTCGAATCCCACCCCATCCGCCA
Downstream region at tRNA end position 
gaccaacggc
Secondary structure (Cloverleaf model)
>WENV170723135	Ser	TGA
                   c      GCCA gaccaacggc
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGTTCACGCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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