The detailed information of tRNA gene sequence


Sequence ID>WENV170723142
Genome IDLSQX01256541
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 134221
End posion on genome 134297
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagttgctgt
tRNA gene sequence 
GGCAGCGTAGCTCAGTTGGTTAGAGCGTAGGACTCATAAGCCTAAGGTCACAGGTTCAAT
CCCTGTCGCTGCTACCA
Downstream region at tRNA end position 
aatcgacttt
Secondary structure (Cloverleaf model)
>WENV170723142	Met	CAT
                   t      ACCA aatcgacttt
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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