The detailed information of tRNA gene sequence


Sequence ID>WENV170723175
Genome IDLSQX01257633
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 24076
End posion on genome 24151
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttaacagcgt
tRNA gene sequence 
GCTCCGATAGTGTAGCTCGGCCAATCATTCAGGACTCTCACTCCTGCGACTGGGGTTCAA
ATCCCCATCGGAGCACtt
Downstream region at tRNA end position 
ttcctttttt
Secondary structure (Cloverleaf model)
>WENV170723175	Glu	CTC
                   t      ACtt ttcctttttt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     A C C C C     A
    T C G A        A      | | | | |     A
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        T     CGAC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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