The detailed information of tRNA gene sequence


Sequence ID>WENV170723268
Genome IDLSQX01262251
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3033
End posion on genome 2948
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaacaaaaT
tRNA gene sequence 
GCCCAGGTAGTCTAGCGGTAAGGCGACGGTCTCGAAAACCGTTTCTTCTTTGGGAGAGCG
CAGGTTCAAATCTTGCCCTGGGCGTaa
Downstream region at tRNA end position 
aaaaatcatc
Secondary structure (Cloverleaf model)
>WENV170723268	Ser	CGA
                   T      GTaa aaaaatcatc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G T T C     A
        G A        A      | | | + |     A
      C     T C T G       G C A G G     C
      G     | | + |                 T T
      G     A G G C
        T A        G     TTCTTCTTTGGGAGAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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