The detailed information of tRNA gene sequence


Sequence ID>WENV170723298
Genome IDLSQX01263399
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 716
End posion on genome 792
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtaggaaaa
tRNA gene sequence 
GGGTCAGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGCTGGTTCGAT
TCCAGCTTGACCCACCA
Downstream region at tRNA end position 
agatttgggg
Secondary structure (Cloverleaf model)
>WENV170723298	Ile	GAT
                   a      ACCA agatttgggg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G + T          T T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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