The detailed information of tRNA gene sequence


Sequence ID>WENV170723307
Genome IDLSQX01263700
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6298
End posion on genome 6223
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccgctcctac
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGGAGAGCGCATGGTTCGCAATCATGAGGTCAGGGGTTCGATC
CCCCTATTCTCCACCA
Downstream region at tRNA end position 
aacgcagaac
Secondary structure (Cloverleaf model)
>WENV170723307	Ala	CGC
                   c      ACCA aacgcagaac
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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