The detailed information of tRNA gene sequence


Sequence ID>WENV170723340
Genome IDLSQX01265178
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2515
End posion on genome 2588
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttcacacccT
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCGCTACGTTCGCAACGTAGAAGCCGCGGGTTCAAATC
CCGCCGAGTCCATac
Downstream region at tRNA end position 
ttctgttttg
Secondary structure (Cloverleaf model)
>WENV170723340	Ala	CGC
                   T      ATac ttctgttttg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AAGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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