The detailed information of tRNA gene sequence


Sequence ID>WENV170723464
Genome IDLSQX01269272
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2071
End posion on genome 2145
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
agtatattat
tRNA gene sequence 
TGGGGTGTCGTCAAGCGGTAAGACACGGGCCTTTGGAGCCCGCATTCGGAGGTTCGAATC
CTCCCACCCCAGCCA
Downstream region at tRNA end position 
ttgtgaatat
Secondary structure (Cloverleaf model)
>WENV170723464	Gln	TTG
                   t      GCCA ttgtgaatat
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C C T C C     A
        G A        C      | | | | |     G
      C     A C T G       G G A G G     C
      G       | | |                 T T
      G     A G A C
        T A        A     CATTC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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