The detailed information of tRNA gene sequence


Sequence ID>WENV170723490
Genome IDLSQX01270272
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1244
End posion on genome 1169
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaccatatct
tRNA gene sequence 
AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGGTTCGATT
CCTACTGCCCCTGCCA
Downstream region at tRNA end position 
aatagtgaag
Secondary structure (Cloverleaf model)
>WENV170723490	Trp	CCA
                   t      GCCA aatagtgaag
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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