The detailed information of tRNA gene sequence


Sequence ID>WENV170723621
Genome IDLSQX01275574
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2609
End posion on genome 2535
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgtatatctt
tRNA gene sequence 
GGCCCCTTCATCTAACGGTTAGGATTCATGGTTTTCATCCATGCCACAGGGGTTCGAATC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
aggtcaaata
Secondary structure (Cloverleaf model)
>WENV170723621	Glu	TTC
                   t      ACCA aggtcaaata
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      C A A        C      | | | | |     G
    G       T C T A       A G G G G     C
    G       + | | |                 T T
    T       G G A T
      T A          T     CCAC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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