The detailed information of tRNA gene sequence


Sequence ID>WENV170723623
Genome IDLSQX01275574
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2418
End posion on genome 2342
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttaaaaggt
tRNA gene sequence 
GCGGCCATAGTTTAGTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGAGTTCGAG
TCTCGTTGGCCGCGCCA
Downstream region at tRNA end position 
ttttaattta
Secondary structure (Cloverleaf model)
>WENV170723623	Asp	GTC
                   t      GCCA ttttaattta
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       T T T G       G C G A G     C
    G       + | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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