The detailed information of tRNA gene sequence


Sequence ID>PHG0100230
Genome IDAY190604
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalovirus HF1 PaP3 (AY190604)
Start position on genome 18508
End posion on genome 18584
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggtggttttT
tRNA gene sequence 
GGGGACGTAGCTCAGCTCGGACAGAGCGTTCGGCTTCTAACCGAAAGTGCGCGGGTTCAA
ATCCCGTCGTCTCCGTgc
Downstream region at tRNA end position 
ggtgtatcgt
Secondary structure (Cloverleaf model)
>PHG0100230	Arg	TCT
                   T      GTgc ggtgtatcgt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    T C G A        A      + | | | |     A
  C         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     AGTGC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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