The detailed information of tRNA gene sequence


Sequence ID>WENV170723748
Genome IDLSQX01280119
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 27356
End posion on genome 27430
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcgataatat
tRNA gene sequence 
GGGGACGTGGCTCAGGGGGAGAGCGCTTGACTCACATTCAAGAGGTCGGAGGTTCAAATC
CTCTCGTCCCCACCA
Downstream region at tRNA end position 
tgaaaagccc
Secondary structure (Cloverleaf model)
>WENV170723748	Val	CAC
                   t      ACCA tgaaaagccc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
        G A        G      + | | | |     A
      G     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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