The detailed information of tRNA gene sequence


Sequence ID>WENV170723751
Genome IDLSQX01280245
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 55509
End posion on genome 55436
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctgaggttgc
tRNA gene sequence 
GCCACCTTAGCTCAGCTGGCCAGAGCACGTGACTTGTAATCTCGGGGTCGTCAGTTCGAA
TCTGACAGGTGGCTgct
Downstream region at tRNA end position 
tattttaggg
Secondary structure (Cloverleaf model)
>WENV170723751	Thr	TGT
                   c      Tgct tattttaggg
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T A
                    T     C A G T C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     GGGTC
                    C - G
                    G - C
                    T   T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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