The detailed information of tRNA gene sequence


Sequence ID>WENV170723928
Genome IDLSQX01285760
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5569
End posion on genome 5494
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aatacaaaaa
tRNA gene sequence 
GGGCTCGTGGCTTAGCCAGGATATAGCGCTGGGCTTCTAACCCAGACGCCGGGGGTTCAA
ATCCCTTCGGGCCCGCtt
Downstream region at tRNA end position 
aatttttact
Secondary structure (Cloverleaf model)
>WENV170723928	Arg	TCT
                   a      GCtt aatttttact
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      + + | | |     A
  A         T T C G       G G G G G     C
  G           | | |                 T T
  G         T A G C
    A T A          G     ACGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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