The detailed information of tRNA gene sequence


Sequence ID>WENV170724025
Genome IDLSQX01289889
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7231
End posion on genome 7156
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccagaacgac
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCTGCGGTTCGATC
CCGCATAGCTCCACCA
Downstream region at tRNA end position 
atttctcaag
Secondary structure (Cloverleaf model)
>WENV170724025	Ala	GGC
                   c      ACCA atttctcaag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     A C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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