The detailed information of tRNA gene sequence


Sequence ID>WENV170724032
Genome IDLSQX01290450
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1186
End posion on genome 1100
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttcaatgT
tRNA gene sequence 
GACGAGATAGCCAAGCCCGGTATGGCGCGGGATTGCTAATCCCGTGATGCTCCGCATCCC
GGGGGTTCGAGTCCCCCTCTCGTCGTtt
Downstream region at tRNA end position 
cttttttaat
Secondary structure (Cloverleaf model)
>WENV170724032	Ser	GCT
                   T      GTtt cttttttaat
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G G G G G     C
    C       | | | |                 T T
    G       T G G C
      G T A        G     TGATGCTCCGCATCCC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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