The detailed information of tRNA gene sequence


Sequence ID>WENV170724058
Genome IDLSQX01291630
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 177
End posion on genome 104
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aatgtctcta
tRNA gene sequence 
CGGGGTGTAGTTCAGATGGCTAGAACGCTTGCATGGGGTGCAAGAGGTCGCTCGTTCAAG
TCGAGTCACCCCGAtcc
Downstream region at tRNA end position 
cgccaaccta
Secondary structure (Cloverleaf model)
>WENV170724058	Pro	GGG
                   a      Atcc cgccaaccta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G A G C     A
      A G A        A      + | | | |     A
    T       C T T G       G C T C G     C
    G       | | | |                 T T
    G       G A A C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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