The detailed information of tRNA gene sequence


Sequence ID>WENV170724159
Genome IDLSQX01295456
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 7002
End posion on genome 6926
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tagcagatgc
tRNA gene sequence 
GGGCCCGTAGCTTAGTCAGGCAGAGCGATGGACTCTTAATCCATAGGCCGAGGGTTCAAA
TCCCTTCGGGCCCGCTA
Downstream region at tRNA end position 
ccattatcta
Secondary structure (Cloverleaf model)
>WENV170724159	Lys	CTT
                   c      GCTA ccattatcta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     A
    C       T T C G       G A G G G     C
    A       + | | |                 T T
    G       G A G C
      G C A        G     AGGCC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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