The detailed information of tRNA gene sequence


Sequence ID>WENV170724171
Genome IDLSQX01296017
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 125
End posion on genome 50
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cgccattttt
tRNA gene sequence 
GCCCAGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCAGTGGTTCGATT
CCGCTTCTGGGCACCA
Downstream region at tRNA end position 
ggtgcgggtt
Secondary structure (Cloverleaf model)
>WENV170724171	Phe	GAA
                   t      ACCA ggtgcgggtt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     T C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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