The detailed information of tRNA gene sequence


Sequence ID>WENV170724234
Genome IDLSQX01297976
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 142
End posion on genome 216
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aatgaattgc
tRNA gene sequence 
GGGGTCGTAGGGTAGCCTGGACCATCCTATTACGTTCGGGACGTAGTGACCTGAGTTCGA
ATCTCAGCGACCCCAttt
Downstream region at tRNA end position 
ttccattctc
Secondary structure (Cloverleaf model)
>WENV170724234	Pro	CGG
                   c      Attt ttccattctc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     G
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    A C C A        A     TGAC
                    T + G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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