The detailed information of tRNA gene sequence


Sequence ID>WENV170724243
Genome IDLSQX01298122
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2161
End posion on genome 2074
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
agtatcaggc
tRNA gene sequence 
GCGAGGGTTGCCAAGCCAGGTCAAAGGCGATAGGTTCAGGGCCTATTCTCGTAGGAGTTC
GCCGGTTCGAATCCGGCTCCTCGCACTA
Downstream region at tRNA end position 
tttctttgat
Secondary structure (Cloverleaf model)
>WENV170724243	Leu	CAG
                   c      ACTA tttctttgat
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C G G C C     A
    C C G A        T      | | | | |     G
  A         A C C G       G C C G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTCGTAGGAGTTC
                    A - T
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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