The detailed information of tRNA gene sequence


Sequence ID>WENV170724311
Genome IDLSQX01300411
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 8989
End posion on genome 9062
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cttcggtttc
tRNA gene sequence 
GCCACCTTAGCTCAGCTGGCCAGAGCACGTGACTTGTAATCTCGGGGTCGTCAGTTCGAA
TCTGACAGGTGGCTatt
Downstream region at tRNA end position 
ccgaaaccct
Secondary structure (Cloverleaf model)
>WENV170724311	Thr	TGT
                   c      Tatt ccgaaaccct
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T A
                    T     C A G T C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     GGGTC
                    C - G
                    G - C
                    T   T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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