The detailed information of tRNA gene sequence


Sequence ID>WENV170724329
Genome IDLSQX01301130
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 17416
End posion on genome 17492
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gggttgctgt
tRNA gene sequence 
CGGGGTGTAGCGCAGTTTGGTAGCGCACCTGGTTTGGGACCAGGGGGCCGCGGGTTCAAA
TCCTGCCACCCCGACCA
Downstream region at tRNA end position 
ttttaatatg
Secondary structure (Cloverleaf model)
>WENV170724329	Pro	TGG
                   t      ACCA ttttaatatg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C G C G       G C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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