The detailed information of tRNA gene sequence


Sequence ID>WENV170724422
Genome IDLSQX01305158
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1058
End posion on genome 982
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaaccgatcc
tRNA gene sequence 
GGGCTCATAGCTCAGCTGGTTAGAGCGTACGCCTGATAAGCGTAAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
gtatcagaag
Secondary structure (Cloverleaf model)
>WENV170724422	Ile	GAT
                   c      ACCA gtatcagaag
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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