The detailed information of tRNA gene sequence


Sequence ID>WENV170724477
Genome IDLSQX01306886
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9365
End posion on genome 9294
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tctaaatagt
tRNA gene sequence 
GCCAAGATGGCGGAGCGGCTACGCAATCGCCTGCAGAGCGATTTCATTCCGGTTCGAATC
CGGATCTTGGCTttt
Downstream region at tRNA end position 
ctcaaaatcc
Secondary structure (Cloverleaf model)
>WENV170724477	Cys	GCA
                   t      Tttt ctcaaaatcc
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     TTCAT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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