The detailed information of tRNA gene sequence


Sequence ID>WENV170724760
Genome IDLSQX01317982
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 17044
End posion on genome 16972
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcccgaacag
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTTTCATTCTTGAAAGAGGGGTTCGACTC
CCCTATGGGCTACat
Downstream region at tRNA end position 
aatatatata
Secondary structure (Cloverleaf model)
>WENV170724760	Glu	TTC
                   g      ACat aatatatata
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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