The detailed information of tRNA gene sequence


Sequence ID>WENV170724825
Genome IDLSQX01320229
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6329
End posion on genome 6254
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gctcgccagt
tRNA gene sequence 
GGCCGGGTAGCTCAGTTGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGGGGTTCGATT
CCCTCCCCGGCCACCA
Downstream region at tRNA end position 
ctacgaacac
Secondary structure (Cloverleaf model)
>WENV170724825	Phe	GAA
                   t      ACCA ctacgaacac
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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