The detailed information of tRNA gene sequence


Sequence ID>WENV170724831
Genome IDLSQX01320505
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 16278
End posion on genome 16204
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttaaaagca
tRNA gene sequence 
GGTCCTATAGCTCAGCTGGTTAGAGCACTTGACTCATAATCAAGGGGTCCCTGGTTCAAG
CCCAGGTGGGACCACat
Downstream region at tRNA end position 
ctttatctta
Secondary structure (Cloverleaf model)
>WENV170724831	Met	CAT
                   a      ACat ctttatctta
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G G A C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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