The detailed information of tRNA gene sequence


Sequence ID>WENV170724887
Genome IDLSQX01321991
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 37
End posion on genome 108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctctctgc
tRNA gene sequence 
GGGCCTGTAGCTTAGTGGTGGAGCGCCCGGCTCATAACCGGGTGGTCGTGGGTTCGAACC
CCTCCGGGCCCAttc
Downstream region at tRNA end position 
tttttacatt
Secondary structure (Cloverleaf model)
>WENV170724887	Met	CAT
                   c      Attc tttttacatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          C A
                    T     C T C C C     A
        G A        A      |   | | |     G
      T     T T C G       G T G G G     C
      G     + | | |                 T T
      G     G A G C
        T G        G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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