The detailed information of tRNA gene sequence


Sequence ID>WENV170724890
Genome IDLSQX01322119
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 330
End posion on genome 256
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accatcgtat
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTC
ACCTATGGGTCACCA
Downstream region at tRNA end position 
ttaaagcagg
Secondary structure (Cloverleaf model)
>WENV170724890	Glu	TTC
                   t      ACCA ttaaagcagg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C   T
                     T - A          T G
                    T     T C C A C     A
      C G A        G      | | |   |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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