The detailed information of tRNA gene sequence


Sequence ID>WENV170724911
Genome IDLSQX01323413
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 551
End posion on genome 626
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tacgtttctc
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCTGCGGTTCGATC
CCGCATGGCTCCACCA
Downstream region at tRNA end position 
attaccgcgc
Secondary structure (Cloverleaf model)
>WENV170724911	Ala	TGC
                   c      ACCA attaccgcgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     A C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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