The detailed information of tRNA gene sequence


Sequence ID>WENV170724913
Genome IDLSQX01323453
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2382
End posion on genome 2306
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttacaaacgT
tRNA gene sequence 
GGGCTTGTGGCTTAGCCAGGATATAGCGTCGGGCTTCTAACCCGAATGTCGGGGGTTCGA
ATCCCTCCAGGCCCGTat
Downstream region at tRNA end position 
aacgcttttt
Secondary structure (Cloverleaf model)
>WENV170724913	Arg	TCT
                   T      GTat aacgcttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  A         T T C G       G G G G G     C
  G           | | |                 T T
  G         T A G C
    A T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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