The detailed information of tRNA gene sequence


Sequence ID>WENV170724919
Genome IDLSQX01323766
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5345
End posion on genome 5420
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgttacaaat
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGGAGAGCGTACGGTTCGCATCCGTAAGGTCGAGAGTTCGATC
CTCTTCGTCTCCACCA
Downstream region at tRNA end position 
tataagcacg
Secondary structure (Cloverleaf model)
>WENV170724919	Ala	CGC
                   t      ACCA tataagcacg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          C T
                    T     T T C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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