The detailed information of tRNA gene sequence


Sequence ID>WENV170724961
Genome IDLSQX01325067
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5613
End posion on genome 5532
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taatcaaaaT
tRNA gene sequence 
GCCCAGGTCGTCTAGCGGTATGGCGACGGTCTCGAAAACCGTTCCCCTTGGGATCGCAGG
TTCGAATCCTGCCCTGGGCGTaa
Downstream region at tRNA end position 
ttttcaggat
Secondary structure (Cloverleaf model)
>WENV170724961	Ser	CGA
                   T      GTaa ttttcaggat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G T C C     A
        G A        C      | | | | |     G
      C     T C T G       G C A G G     C
      G       | + |                 T T
      G     T G G C
        T A        G     TCCCCTTGGGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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