The detailed information of tRNA gene sequence


Sequence ID>WENV170725022
Genome IDLSQX01327958
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 234
End posion on genome 159
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttcaaatct
tRNA gene sequence 
GCTCATGTAGCTCAGTCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCGCTGGTTCGATT
CCAGTCATGAGCACCA
Downstream region at tRNA end position 
ttccggccat
Secondary structure (Cloverleaf model)
>WENV170725022	Thr	GGT
                   t      ACCA ttccggccat
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     T G A C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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