The detailed information of tRNA gene sequence


Sequence ID>WENV170725159
Genome IDLSQX01332655
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2295
End posion on genome 2220
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agaattatat
tRNA gene sequence 
TCCTCAATAGCTCAGTCGGTAGAGCATGCGGCTGTTAACCGCAGGGTCGTAGGTTCGAGT
CCTACTTGAGGAGCCA
Downstream region at tRNA end position 
tacgggcctt
Secondary structure (Cloverleaf model)
>WENV170725159	Asn	GTT
                   t      GCCA tacgggcctt
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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