The detailed information of tRNA gene sequence


Sequence ID>WENV170725186
Genome IDLSQX01334178
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 8341
End posion on genome 8413
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggcagtttga
tRNA gene sequence 
GCTGATATAGTGTAGAGGCCAATCATGCCGGCCTTTCACGCCGGCGACTCGGGTTCGAAT
CCCGATATCAGCAttt
Downstream region at tRNA end position 
ccggcggcat
Secondary structure (Cloverleaf model)
>WENV170725186	Glu	TTC
                   a      Attt ccggcggcat
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     A G C C C     A
      A G A        A      | | | | |     G
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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