The detailed information of tRNA gene sequence


Sequence ID>WENV170725444
Genome IDLSQX01342640
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6333
End posion on genome 6409
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gaagcacttt
tRNA gene sequence 
AGGCGTATAGCTCAGTTGGTTAGAGCGCTACGTTGACATCGTAGAGGTCTCCAGTTCGAG
TCTGGATATGCCTACCA
Downstream region at tRNA end position 
tatacatatc
Secondary structure (Cloverleaf model)
>WENV170725444	Val	GAC
                   t      ACCA tatacatatc
                     A - T
                     G - C
                     G - C
                     C - G
                     G + T
                     T - A
                     A - T          T G
                    T     A G G T C     A
      T G A        A      | | | | |     G
    T       C T C G       T C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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