The detailed information of tRNA gene sequence


Sequence ID>WENV170725651
Genome IDLSQX01350985
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 192
End posion on genome 102
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgttcccgtt
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGCTCCCCTGCTAAGGGAGTACACCTCAAAAGGGT
GTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttacgttgt
Secondary structure (Cloverleaf model)
>WENV170725651	Ser	GCT
                   t      GCCA tttacgttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TACACCTCAAAAGGGTGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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