The detailed information of tRNA gene sequence


Sequence ID>WENV170725652
Genome IDLSQX01351237
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1338
End posion on genome 1413
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcaccgattt
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGGAGAGCGTACGGTTCGCATCCGTAAGGTCGAGAGTTCGATC
CTCTTCGTCTCCACCA
Downstream region at tRNA end position 
caaatgaaaa
Secondary structure (Cloverleaf model)
>WENV170725652	Ala	CGC
                   t      ACCA caaatgaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     G - C          C T
                    T     T T C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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